Software

You can find some of the useful scripts or tools that I have developed here.

Neddylation is a lysine post-translational modification, where a NEDD8 (or a homologue) is bound to target protein, altering localisation, function or lifespan of a protein. When distrupted, it may cause in serious diseases
such as Alzheimer’s and cancer.

NeddyPreddy predicts protein neddylation sites and gives detailed reports.

You can access to NeddyPreddy server at http://neddypreddy.sabanciuniv.edu. Also, you can download the standalone version of NeddyPreddy from https://bitbucket.com/asyavuz/neddypreddy/.

Citation: A.S. Yavuz, N.B. Sözer, and O.U. Sezerman (2015) “Prediction of neddylation sites from protein sequences and sequence-derived properties“, BMC Bioinformatics, S18, S9.

Citation: A.S. Yavuz, N.B. Sözer, and O.U. Sezerman, “NeddyPreddy: prediction of neddylation sites from protein sequences”, under preparation.